Non-linear molecular pattern classification using molecular beacons with multiple targets

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초록

In vitro pattern classification has been highlighted as an important future application of DNA computing. Previous work has demonstrated the feasibility of linear classifiers using DNA-based molecular computing. However, complex tasks require non-linear classification capability. Here we design a molecular beacon that can interact with multiple targets and experimentally shows that its fluorescent signals form a complex radial-basis function, enabling it to be used as a building block for non-linear molecular classification in vitro. The proposed method was successfully applied to solving artificial and real-world classification problems: XOR and microRNA expression patterns. © 2013 Elsevier Ireland Ltd.

키워드

Biological data analysis; DNA computing; Molecular beacons; Molecular pattern classification; Non-linear classification; GENE-EXPRESSION; DNA SOLUTIONCOMPUTATION; COMPUTER
제목
Non-linear molecular pattern classification using molecular beacons with multiple targets
저자
Lee, In-hee; LEE, SEUNG HWAN; Park, Tai Hyun; Zhang, Byoungtak
DOI
10.1016/j.biosystems.2013.05.008
발행일
2013-12
저널명
BioSystems
권
114
호
3
페이지
206 ~ 213